G4PhysChemIO::FormattedText Class Reference

#include <G4PhysChemIO.hh>

Inheritance diagram for G4PhysChemIO::FormattedText:

Public Member Functions
virtual void	AddEmptyLineInOutputFile ()
virtual void	CloseFile ()
virtual void	CreateSolvatedElectron (const G4Track *, G4ThreeVector *finalPosition=0)
virtual void	CreateWaterMolecule (G4int electronicModif, G4int, G4double energy, const G4Track *)
	FormattedText ()
virtual void	InitializeFile ()
virtual void	InitializeMaster ()
virtual void	InitializeThread ()
virtual void	NewEvent ()
virtual void	NewRun ()
virtual void	WriteInto (const G4String &, std::ios_base::openmode mode=std::ios_base::out)
virtual	~FormattedText ()

Protected Attributes
G4int	fEventID
G4bool	fFileInitialized
std::ofstream	fOfstream
G4int	fRunID

Detailed Description

Definition at line 40 of file G4PhysChemIO.hh.

Constructor & Destructor Documentation

FormattedText()

G4PhysChemIO::FormattedText::FormattedText

(

)

Definition at line 44 of file G4PhysChemIO.cc.

                            {
  fRunID = -1;
  fEventID = -1;
  fFileInitialized = false;
}

References fEventID, fFileInitialized, and fRunID.

~FormattedText()

G4PhysChemIO::FormattedText::~FormattedText ( )

virtual

Definition at line 52 of file G4PhysChemIO.cc.

                             {
  CloseFile();
}

References CloseFile().

Member Function Documentation

AddEmptyLineInOutputFile()

void G4PhysChemIO::FormattedText::AddEmptyLineInOutputFile ( )

virtual

Reimplemented from G4VPhysChemIO.

Definition at line 89 of file G4PhysChemIO.cc.

{
  if(fFileInitialized) fOfstream << G4endl;
}

References fFileInitialized, fOfstream, and G4endl.

CloseFile()

void G4PhysChemIO::FormattedText::CloseFile ( )

virtual

Close the file specified with WriteInto

Implements G4VPhysChemIO.

Definition at line 96 of file G4PhysChemIO.cc.

{
  if (fFileInitialized == false) return;
  
  if (fOfstream.is_open())
  {
    fOfstream.close();
  }
}

References fFileInitialized, and fOfstream.

Referenced by ~FormattedText().

CreateSolvatedElectron()

void G4PhysChemIO::FormattedText::CreateSolvatedElectron ( const G4Track *  theIncomingTrack, G4ThreeVector *  finalPosition = 0  )

virtual

Same idea as the previous method but for solvated electron. This method should be used by the physics model of the ElectronSolvatation process.

Implements G4VPhysChemIO.

Definition at line 131 of file G4PhysChemIO.cc.

{
  if(!fFileInitialized) InitializeFile();
  
  fOfstream << setw(11) << theIncomingTrack->GetTrackID() << setw(10)
  << "e_aq" << setw(14) << -1 << std::setprecision(2)
  << std::fixed << setw(13)
  << theIncomingTrack->GetKineticEnergy() / eV
  << std::setprecision(6) << std::scientific << setw(22)
  << (theIncomingTrack->GetPosition().x()) / nanometer
  << setw(22)
  << (theIncomingTrack->GetPosition().y()) / nanometer
  << setw(22)
  << (theIncomingTrack->GetPosition().z()) / nanometer;
  
  if (finalPosition != 0)
  {
    fOfstream << setw(14) << (finalPosition->x()) / nanometer << setw(14)
    << (finalPosition->y()) / nanometer << setw(14)
    << (finalPosition->z()) / nanometer;
  }
  
  fOfstream << G4endl;
}

References eV, fFileInitialized, fOfstream, G4endl, G4Track::GetKineticEnergy(), G4Track::GetPosition(), G4Track::GetTrackID(), InitializeFile(), nanometer, CLHEP::Hep3Vector::x(), CLHEP::Hep3Vector::y(), and CLHEP::Hep3Vector::z().

CreateWaterMolecule()

void G4PhysChemIO::FormattedText::CreateWaterMolecule ( G4int  electronicModif, G4int  electronicLevel, G4double  energy, const G4Track *  theIncomingTrack  )

virtual

When DNA physics model create a water molecule, you'll get a notification through this method. The ElectronicModification is a flag telling whether the molecule is ionized or excited, the electronic level is calculated by the model and the IncomingTrack is the track responsible for the creation of this molecule (electron, proton...)

Implements G4VPhysChemIO.

Definition at line 108 of file G4PhysChemIO.cc.

{
  if(!fFileInitialized) InitializeFile();
  
  fOfstream << setw(11) << left << theIncomingTrack->GetTrackID()
  << setw(10) << "H2O" << left << modification << internal
  << ":" << right << electronicLevel << left << setw(11) << ""
  << std::setprecision(2) << std::fixed << setw(13)
  << energy / eV << std::setprecision(6) << std::scientific
  << setw(22)
  << (theIncomingTrack->GetPosition().x()) / nanometer
  << setw(22)
  << (theIncomingTrack->GetPosition().y()) / nanometer
  << setw(22)
  << (theIncomingTrack->GetPosition().z()) / nanometer
  << G4endl;
}

References G4INCL::KinematicsUtils::energy(), eV, fFileInitialized, fOfstream, G4endl, G4Track::GetPosition(), G4Track::GetTrackID(), InitializeFile(), nanometer, CLHEP::Hep3Vector::x(), CLHEP::Hep3Vector::y(), and CLHEP::Hep3Vector::z().

InitializeFile()

void G4PhysChemIO::FormattedText::InitializeFile ( )

virtual

Implements G4VPhysChemIO.

Definition at line 58 of file G4PhysChemIO.cc.

{
  if(fFileInitialized) return;
  
  fOfstream << std::setprecision(6) << std::scientific;
  fOfstream << setw(11) << left << "#Parent ID" << setw(10) << "Molecule"
  << setw(14) << "Elec Modif" << setw(13) << "Energy (eV)"
  << setw(22) << "X pos of parent [nm]" << setw(22)
  << "Y pos of parent [nm]" << setw(22) << "Z pos of parent [nm]"
  << setw(14) << "X pos [nm]" << setw(14) << "Y pos [nm]"
  << setw(14) << "Z pos [nm]" << G4endl<< setw(21) << "#"
  << setw(13) << "1)io/ex=0/1"
  << G4endl
  << setw(21) << "#"
  << setw(13) << "2)level=0...5"
  << G4endl;
  
  fFileInitialized = true;
}

References fFileInitialized, fOfstream, and G4endl.

Referenced by CreateSolvatedElectron(), and CreateWaterMolecule().

InitializeMaster()

virtual void G4PhysChemIO::FormattedText::InitializeMaster ( )

inlinevirtual

Reimplemented from G4VPhysChemIO.

Definition at line 46 of file G4PhysChemIO.hh.

{}

InitializeThread()

virtual void G4PhysChemIO::FormattedText::InitializeThread ( )

inlinevirtual

Reimplemented from G4VPhysChemIO.

Definition at line 47 of file G4PhysChemIO.hh.

{}

NewEvent()

virtual void G4PhysChemIO::FormattedText::NewEvent ( )

inlinevirtual

Implements G4VPhysChemIO.

Definition at line 51 of file G4PhysChemIO.hh.

{}

NewRun()

virtual void G4PhysChemIO::FormattedText::NewRun ( )

inlinevirtual

Implements G4VPhysChemIO.

Definition at line 50 of file G4PhysChemIO.hh.

{}

WriteInto()

void G4PhysChemIO::FormattedText::WriteInto ( const G4String &  , std::ios_base::openmode  mode = std::ios_base::out  )

virtual

Tells the chemistry manager to write into a file the position and electronic state of the water molecule and the position thermalized or not of the solvated electron

Implements G4VPhysChemIO.

Definition at line 80 of file G4PhysChemIO.cc.

{
  fOfstream.open(output.data(), mode);
  fFileInitialized = false;
}

References fFileInitialized, and fOfstream.

Field Documentation

fEventID

G4int G4PhysChemIO::FormattedText::fEventID

protected

Definition at line 94 of file G4PhysChemIO.hh.

Referenced by FormattedText().

fFileInitialized

G4bool G4PhysChemIO::FormattedText::fFileInitialized

protected

Definition at line 95 of file G4PhysChemIO.hh.

Referenced by AddEmptyLineInOutputFile(), CloseFile(), CreateSolvatedElectron(), CreateWaterMolecule(), FormattedText(), InitializeFile(), and WriteInto().

fOfstream

std::ofstream G4PhysChemIO::FormattedText::fOfstream

protected

Definition at line 96 of file G4PhysChemIO.hh.

Referenced by AddEmptyLineInOutputFile(), CloseFile(), CreateSolvatedElectron(), CreateWaterMolecule(), InitializeFile(), and WriteInto().

fRunID

G4int G4PhysChemIO::FormattedText::fRunID

protected

Definition at line 93 of file G4PhysChemIO.hh.

Referenced by FormattedText().

---

The documentation for this class was generated from the following files:

• source/processes/electromagnetic/dna/utils/include/G4PhysChemIO.hh
• source/processes/electromagnetic/dna/utils/src/G4PhysChemIO.cc